Metadata-Version: 2.1
Name: acore
Version: 0.1.0
Summary: A Python package with statistical functions to analyse multimodal molecular data
Home-page: https://github.com/Multiomics-Analytics-Group/acore
Author-email: Alberto Santos Delgado <albsad@dtu.dk>
License: GNU General Public License v3
Project-URL: Homepage, https://github.com/Multiomics-Analytics-Group/acore
Project-URL: Issues, https://github.com/Multiomics-Analytics-Group/acore/issues
Project-URL: Documentation, https://analytics-core.readthedocs.io/
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Requires-Python: >=3.6
Description-Content-Type: text/x-rst
License-File: LICENSE
License-File: AUTHORS.rst
Requires-Dist: click >=7.0
Requires-Dist: numpy ==1.23.2
Requires-Dist: pandas ==2.0.2
Requires-Dist: scipy ==1.10.1
Requires-Dist: networkx ==3.1
Requires-Dist: biopython ==1.81
Requires-Dist: combat ==0.3.3
Requires-Dist: gseapy ==1.0.4
Requires-Dist: kmapper ==2.0.1
Requires-Dist: lifelines ==0.27.7
Requires-Dist: pingouin ==0.5.3
Requires-Dist: python-louvain ==0.16
Requires-Dist: PyWGCNA ==1.16.8
Requires-Dist: snfpy ==0.2.2
Requires-Dist: umap-learn ==0.5.3
Requires-Dist: statsmodels
Provides-Extra: dev
Requires-Dist: pytest >=3 ; extra == 'dev'

==============
Analytics Core
==============


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    :target: https://analytics-core.readthedocs.io/
    :alt: Documentation Status

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    :alt: GitHub Actions Tox Status
    :target: https://github.com/Multiomics-Analytics-Group/acore/actions/workflows/tox.yml

.. |version| image:: https://img.shields.io/pypi/v/acore.svg
    :alt: PyPI Package latest release
    :target: https://pypi.org/project/acore

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    :target: https://pypi.org/project/acore

.. |supported-versions| image:: https://img.shields.io/pypi/pyversions/acore.svg
    :alt: Supported versions
    :target: https://pypi.org/project/acore

.. |supported-implementations| image:: https://img.shields.io/pypi/implementation/acore.svg
    :alt: Supported implementations
    :target: https://pypi.org/project/acore

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A Python package with statistical functions to analyse multimodal molecular data


* Free software: GNU General Public License v3
* Documentation: https://analytics-core.readthedocs.io.


Installation
============

::

    pip install acore

You can also install the in-development version with::

    pip install https://github.com/Multiomics-Analytics-Group/acore/archive/main.zip



Development
===========

To run all the tests run::

    pytest 
